Cluster: HRGMv2_4014_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4014
- CGC Family ID: CGCFAM_02253
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4014_6 | HRGMv2_4014_6_49 | 49110 | 50609 | - | GH23 |
| TC | HRGMv2_4014_6 | HRGMv2_4014_6_50 | 50757 | 52421 | + | 3.A.1.120.6 |
| pfam | HRGMv2_4014_6 | HRGMv2_4014_6_51 | 52491 | 55916 | + | tRNA_anti-codon | PHP | DNA_pol3_alpha | HHH_6 | DNA_pol3_finger |
| pfam | HRGMv2_4014_6 | HRGMv2_4014_6_52 | 55922 | 56962 | - | Glycos_transf_1 | Glyco_transf_4 | Glyco_trans_1_4 | GT4-conflict |
| CAZyme | HRGMv2_4014_6 | HRGMv2_4014_6_53 | 57009 | 57806 | - | GT2 |
| CAZyme | HRGMv2_4014_6 | HRGMv2_4014_6_54 | 57811 | 58686 | - | GT9 |
| TC | HRGMv2_4014_6 | HRGMv2_4014_6_55 | 59821 | 60663 | + | 3.A.1.106.2 |
Gene ID: HRGMv2_4014_6_49
Type: CAZyme
Location: 49110 - 50609 (-)
Type: CAZyme
Location: 49110 - 50609 (-)
Gene ID: HRGMv2_4014_6_50
Type: TC
Location: 50757 - 52421 (+)
Type: TC
Location: 50757 - 52421 (+)
Gene ID: HRGMv2_4014_6_51
Type: pfam
Location: 52491 - 55916 (+)
Type: pfam
Location: 52491 - 55916 (+)
Gene ID: HRGMv2_4014_6_52
Type: pfam
Location: 55922 - 56962 (-)
Type: pfam
Location: 55922 - 56962 (-)
Gene ID: HRGMv2_4014_6_53
Type: CAZyme
Location: 57009 - 57806 (-)
Type: CAZyme
Location: 57009 - 57806 (-)
Gene ID: HRGMv2_4014_6_54
Type: CAZyme
Location: 57811 - 58686 (-)
Type: CAZyme
Location: 57811 - 58686 (-)
Gene ID: HRGMv2_4014_6_55
Type: TC
Location: 59821 - 60663 (+)
Type: TC
Location: 59821 - 60663 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Duodenibacillus
Species
Duodenibacillus sp944390145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.