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Cluster: HRGMv2_4013_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4013_28 HRGMv2_4013_28_6 5562 6518 + 2.A.69.3.5
pfam HRGMv2_4013_28 HRGMv2_4013_28_7 6515 7801 - Sugar_tr | MFS_1 | MFS_1
peptidase HRGMv2_4013_28 HRGMv2_4013_28_8 7824 9023 - M20.UPD
TC HRGMv2_4013_28 HRGMv2_4013_28_9 9464 10987 - 2.A.47.1.12
TC HRGMv2_4013_28 HRGMv2_4013_28_10 11155 12927 - 3.A.1.106.1
CAZyme HRGMv2_4013_28 HRGMv2_4013_28_11 13019 13960 + GT9
pfam HRGMv2_4013_28 HRGMv2_4013_28_12 14006 14938 + EamA
TC HRGMv2_4013_28 HRGMv2_4013_28_13 15081 16460 + 2.A.61.1.2
Gene ID: HRGMv2_4013_28_6
Type: TC
Location: 5562 - 6518 (+)
Gene ID: HRGMv2_4013_28_7
Type: pfam
Location: 6515 - 7801 (-)
Gene ID: HRGMv2_4013_28_8
Type: peptidase
Location: 7824 - 9023 (-)
Gene ID: HRGMv2_4013_28_9
Type: TC
Location: 9464 - 10987 (-)
Gene ID: HRGMv2_4013_28_10
Type: TC
Location: 11155 - 12927 (-)
Gene ID: HRGMv2_4013_28_11
Type: CAZyme
Location: 13019 - 13960 (+)
Gene ID: HRGMv2_4013_28_12
Type: pfam
Location: 14006 - 14938 (+)
Gene ID: HRGMv2_4013_28_13
Type: TC
Location: 15081 - 16460 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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