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Cluster: HRGMv2_4012_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4012_4 HRGMv2_4012_4_60 61585 62361 - 3.A.1.27.3
TC HRGMv2_4012_4 HRGMv2_4012_4_61 62358 63158 - 3.A.1.27.3
pfam HRGMv2_4012_4 HRGMv2_4012_4_62 63281 63748 - Acyl-ACP_TE | 4HBT | 4HBT_2 | Acyl-ACP_TE_C
CAZyme HRGMv2_4012_4 HRGMv2_4012_4_63 63972 66335 + GT51
pfam HRGMv2_4012_4 HRGMv2_4012_4_64 66350 66664 - Frataxin_Cyay
pfam HRGMv2_4012_4 HRGMv2_4012_4_65 66846 68120 + Orn_DAP_Arg_deC | Orn_Arg_deC_N
TC HRGMv2_4012_4 HRGMv2_4012_4_66 68236 69921 + 2.A.81.1.2
Gene ID: HRGMv2_4012_4_60
Type: TC
Location: 61585 - 62361 (-)
Gene ID: HRGMv2_4012_4_61
Type: TC
Location: 62358 - 63158 (-)
Gene ID: HRGMv2_4012_4_62
Type: pfam
Location: 63281 - 63748 (-)
Gene ID: HRGMv2_4012_4_63
Type: CAZyme
Location: 63972 - 66335 (+)
Gene ID: HRGMv2_4012_4_64
Type: pfam
Location: 66350 - 66664 (-)
Gene ID: HRGMv2_4012_4_65
Type: pfam
Location: 66846 - 68120 (+)
Gene ID: HRGMv2_4012_4_66
Type: TC
Location: 68236 - 69921 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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