Cluster: HRGMv2_4012_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4012
- CGC Family ID: CGCFAM_00291
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4012_1 | HRGMv2_4012_1_81 | 88701 | 91475 | - | 3.A.5.1.1 |
| NULL(UNKNOWN) | HRGMv2_4012_1 | HRGMv2_4012_1_82 | 91704 | 92162 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4012_1 | HRGMv2_4012_1_83 | 92159 | 92806 | - | 2.A.76.1.5 |
| CAZyme | HRGMv2_4012_1 | HRGMv2_4012_1_84 | 92891 | 93802 | - | CE11 |
Gene ID: HRGMv2_4012_1_81
Type: TC
Location: 88701 - 91475 (-)
Type: TC
Location: 88701 - 91475 (-)
Gene ID: HRGMv2_4012_1_82
Type:
Location: 91704 - 92162 (+)
Type:
Location: 91704 - 92162 (+)
Gene ID: HRGMv2_4012_1_83
Type: TC
Location: 92159 - 92806 (-)
Type: TC
Location: 92159 - 92806 (-)
Gene ID: HRGMv2_4012_1_84
Type: CAZyme
Location: 92891 - 93802 (-)
Type: CAZyme
Location: 92891 - 93802 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Aphodousia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.