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Cluster: HRGMv2_4010_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4010_3 HRGMv2_4010_3_39 51042 52985 + 3.A.1.121.4
pfam HRGMv2_4010_3 HRGMv2_4010_3_40 53005 53751 + SpoU_methylase | SpoU_sub_bind
NULL(UNKNOWN) HRGMv2_4010_3 HRGMv2_4010_3_41 53813 54472 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4010_3 HRGMv2_4010_3_42 54518 55843 + 3.A.5.1.1
pfam HRGMv2_4010_3 HRGMv2_4010_3_43 55867 56739 + THF_DHG_CYH | THF_DHG_CYH_C
TC HRGMv2_4010_3 HRGMv2_4010_3_44 56792 58024 + 9.B.156.3.1
pfam HRGMv2_4010_3 HRGMv2_4010_3_45 58028 59071 + tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M
TC HRGMv2_4010_3 HRGMv2_4010_3_46 59266 62031 - 2.A.21.9.1
TC HRGMv2_4010_3 HRGMv2_4010_3_47 62107 63303 + 2.A.1.46.5
TC HRGMv2_4010_3 HRGMv2_4010_3_48 63410 64360 + 3.A.5.1.1
pfam HRGMv2_4010_3 HRGMv2_4010_3_49 64362 64835 + LMWPc
CAZyme HRGMv2_4010_3 HRGMv2_4010_3_50 64836 67220 + GT51
Gene ID: HRGMv2_4010_3_39
Type: TC
Location: 51042 - 52985 (+)
Gene ID: HRGMv2_4010_3_40
Type: pfam
Location: 53005 - 53751 (+)
Gene ID: HRGMv2_4010_3_41
Type:
Location: 53813 - 54472 (+)
Gene ID: HRGMv2_4010_3_42
Type: TC
Location: 54518 - 55843 (+)
Gene ID: HRGMv2_4010_3_43
Type: pfam
Location: 55867 - 56739 (+)
Gene ID: HRGMv2_4010_3_44
Type: TC
Location: 56792 - 58024 (+)
Gene ID: HRGMv2_4010_3_45
Type: pfam
Location: 58028 - 59071 (+)
Gene ID: HRGMv2_4010_3_46
Type: TC
Location: 59266 - 62031 (-)
Gene ID: HRGMv2_4010_3_47
Type: TC
Location: 62107 - 63303 (+)
Gene ID: HRGMv2_4010_3_48
Type: TC
Location: 63410 - 64360 (+)
Gene ID: HRGMv2_4010_3_49
Type: pfam
Location: 64362 - 64835 (+)
Gene ID: HRGMv2_4010_3_50
Type: CAZyme
Location: 64836 - 67220 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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