dbCAN Logo

Cluster: HRGMv2_4010_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4010_2 HRGMv2_4010_2_70 94467 95600 - GT94
CAZyme HRGMv2_4010_2 HRGMv2_4010_2_71 95710 96681 + GT2
TC HRGMv2_4010_2 HRGMv2_4010_2_72 96685 99177 - 9.B.144.1.4
pfam HRGMv2_4010_2 HRGMv2_4010_2_73 99199 100560 - adh_short | NTP_transferase | IspD | KR | NTP_transf_3 | adh_short_C2
CAZyme HRGMv2_4010_2 HRGMv2_4010_2_74 100631 101650 - GT2
pfam HRGMv2_4010_2 HRGMv2_4010_2_75 101652 102899 - Glyphos_transf
NULL(UNKNOWN) HRGMv2_4010_2 HRGMv2_4010_2_76 102929 103771 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4010_2 HRGMv2_4010_2_77 103805 104995 + GT4
Gene ID: HRGMv2_4010_2_70
Type: CAZyme
Location: 94467 - 95600 (-)
Gene ID: HRGMv2_4010_2_71
Type: CAZyme
Location: 95710 - 96681 (+)
Gene ID: HRGMv2_4010_2_72
Type: TC
Location: 96685 - 99177 (-)
Gene ID: HRGMv2_4010_2_73
Type: pfam
Location: 99199 - 100560 (-)
Gene ID: HRGMv2_4010_2_74
Type: CAZyme
Location: 100631 - 101650 (-)
Gene ID: HRGMv2_4010_2_75
Type: pfam
Location: 101652 - 102899 (-)
Gene ID: HRGMv2_4010_2_76
Type:
Location: 102929 - 103771 (+)
Gene ID: HRGMv2_4010_2_77
Type: CAZyme
Location: 103805 - 104995 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List