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Cluster: HRGMv2_4010_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4010_33 HRGMv2_4010_33_9 7250 8341 + GT2
CAZyme HRGMv2_4010_33 HRGMv2_4010_33_10 8351 9451 + GT4
pfam HRGMv2_4010_33 HRGMv2_4010_33_11 9448 10413 + ATPgrasp_TupA
pfam HRGMv2_4010_33 HRGMv2_4010_33_12 10358 10825 + ATPgrasp_TupA
CAZyme HRGMv2_4010_33 HRGMv2_4010_33_13 10888 11847 + GT32
CAZyme HRGMv2_4010_33 HRGMv2_4010_33_14 11825 12919 + GT4
CAZyme HRGMv2_4010_33 HRGMv2_4010_33_15 12923 14008 + GT4
NULL(UNKNOWN) HRGMv2_4010_33 HRGMv2_4010_33_16 14009 15220 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4010_33 HRGMv2_4010_33_17 15221 16699 + 2.A.66.2.6
Gene ID: HRGMv2_4010_33_9
Type: CAZyme
Location: 7250 - 8341 (+)
Gene ID: HRGMv2_4010_33_10
Type: CAZyme
Location: 8351 - 9451 (+)
Gene ID: HRGMv2_4010_33_11
Type: pfam
Location: 9448 - 10413 (+)
Gene ID: HRGMv2_4010_33_12
Type: pfam
Location: 10358 - 10825 (+)
Gene ID: HRGMv2_4010_33_13
Type: CAZyme
Location: 10888 - 11847 (+)
Gene ID: HRGMv2_4010_33_14
Type: CAZyme
Location: 11825 - 12919 (+)
Gene ID: HRGMv2_4010_33_15
Type: CAZyme
Location: 12923 - 14008 (+)
Gene ID: HRGMv2_4010_33_16
Type:
Location: 14009 - 15220 (+)
Gene ID: HRGMv2_4010_33_17
Type: TC
Location: 15221 - 16699 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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