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Cluster: HRGMv2_4010_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4010_17 HRGMv2_4010_17_18 23028 24695 + 2.A.81.1.2
peptidase HRGMv2_4010_17 HRGMv2_4010_17_19 24722 25507 + C40.009
pfam HRGMv2_4010_17 HRGMv2_4010_17_20 25516 26139 - WbqC
CAZyme HRGMv2_4010_17 HRGMv2_4010_17_21 26583 28568 + GH13_8
CAZyme HRGMv2_4010_17 HRGMv2_4010_17_22 28590 30539 + GH133
CAZyme HRGMv2_4010_17 HRGMv2_4010_17_23 30543 31826 + GT4
CAZyme HRGMv2_4010_17 HRGMv2_4010_17_24 31844 33070 + GH57
CAZyme HRGMv2_4010_17 HRGMv2_4010_17_25 33131 37378 + GT3 | GT35
Gene ID: HRGMv2_4010_17_18
Type: TC
Location: 23028 - 24695 (+)
Gene ID: HRGMv2_4010_17_19
Type: peptidase
Location: 24722 - 25507 (+)
Gene ID: HRGMv2_4010_17_20
Type: pfam
Location: 25516 - 26139 (-)
Gene ID: HRGMv2_4010_17_21
Type: CAZyme
Location: 26583 - 28568 (+)
Gene ID: HRGMv2_4010_17_22
Type: CAZyme
Location: 28590 - 30539 (+)
Gene ID: HRGMv2_4010_17_23
Type: CAZyme
Location: 30543 - 31826 (+)
Gene ID: HRGMv2_4010_17_24
Type: CAZyme
Location: 31844 - 33070 (+)
Gene ID: HRGMv2_4010_17_25
Type: CAZyme
Location: 33131 - 37378 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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