Cluster: HRGMv2_4007_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4007
- CGC Family ID: CGCFAM_00860
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4007_8 | HRGMv2_4007_8_12 | 17462 | 18787 | + | GT4 |
| TC | HRGMv2_4007_8 | HRGMv2_4007_8_13 | 18806 | 21619 | + | 9.B.144.1.4 |
| TC | HRGMv2_4007_8 | HRGMv2_4007_8_14 | 22147 | 23190 | - | 3.A.1.132.3 |
| peptidase | HRGMv2_4007_8 | HRGMv2_4007_8_15 | 23237 | 25315 | - | S46.UPW |
| NULL(UNKNOWN) | HRGMv2_4007_8 | HRGMv2_4007_8_16 | 25487 | 27112 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4007_8 | HRGMv2_4007_8_17 | 27446 | 30559 | + | 1.B.14.6.1 |
| TC | HRGMv2_4007_8 | HRGMv2_4007_8_18 | 30572 | 32101 | + | 8.A.46.3.3 |
Gene ID: HRGMv2_4007_8_12
Type: CAZyme
Location: 17462 - 18787 (+)
Type: CAZyme
Location: 17462 - 18787 (+)
Gene ID: HRGMv2_4007_8_13
Type: TC
Location: 18806 - 21619 (+)
Type: TC
Location: 18806 - 21619 (+)
Gene ID: HRGMv2_4007_8_14
Type: TC
Location: 22147 - 23190 (-)
Type: TC
Location: 22147 - 23190 (-)
Gene ID: HRGMv2_4007_8_15
Type: peptidase
Location: 23237 - 25315 (-)
Type: peptidase
Location: 23237 - 25315 (-)
Gene ID: HRGMv2_4007_8_16
Type:
Location: 25487 - 27112 (-)
Type:
Location: 25487 - 27112 (-)
Gene ID: HRGMv2_4007_8_17
Type: TC
Location: 27446 - 30559 (+)
Type: TC
Location: 27446 - 30559 (+)
Gene ID: HRGMv2_4007_8_18
Type: TC
Location: 30572 - 32101 (+)
Type: TC
Location: 30572 - 32101 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.