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Cluster: HRGMv2_4007_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4007_4 HRGMv2_4007_4_8 12748 13506 + GT2
TC HRGMv2_4007_4 HRGMv2_4007_4_9 13522 14175 + 2.A.123.4.1
CAZyme HRGMv2_4007_4 HRGMv2_4007_4_10 14162 15889 + GT83
pfam HRGMv2_4007_4 HRGMv2_4007_4_11 15961 19332 - BACON | BACON | BACON | BACON_2 | BACON_2
pfam HRGMv2_4007_4 HRGMv2_4007_4_12 19356 21233 - SusD_RagB | SusD-like_3
TC HRGMv2_4007_4 HRGMv2_4007_4_13 21253 24585 - 1.B.14.6.1
pfam HRGMv2_4007_4 HRGMv2_4007_4_14 24633 26600 - Metallophos | MetallophosC | MetallophosN
TC HRGMv2_4007_4 HRGMv2_4007_4_15 26664 28064 - 2.A.1.4.3
Gene ID: HRGMv2_4007_4_8
Type: CAZyme
Location: 12748 - 13506 (+)
Gene ID: HRGMv2_4007_4_9
Type: TC
Location: 13522 - 14175 (+)
Gene ID: HRGMv2_4007_4_10
Type: CAZyme
Location: 14162 - 15889 (+)
Gene ID: HRGMv2_4007_4_11
Type: pfam
Location: 15961 - 19332 (-)
Gene ID: HRGMv2_4007_4_12
Type: pfam
Location: 19356 - 21233 (-)
Gene ID: HRGMv2_4007_4_13
Type: TC
Location: 21253 - 24585 (-)
Gene ID: HRGMv2_4007_4_14
Type: pfam
Location: 24633 - 26600 (-)
Gene ID: HRGMv2_4007_4_15
Type: TC
Location: 26664 - 28064 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
UBA932
→
Genus
Cryptobacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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