Cluster: HRGMv2_4007_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4007
- CGC Family ID: CGCFAM_05169
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4007_1 | HRGMv2_4007_1_39 | 47551 | 48207 | + | 2.A.115.2.8 |
| pfam | HRGMv2_4007_1 | HRGMv2_4007_1_40 | 48233 | 49207 | + | Phage_integrase | Phage_int_SAM_1 |
| pfam | HRGMv2_4007_1 | HRGMv2_4007_1_41 | 49197 | 49490 | + | Ribosomal_S30AE |
| CAZyme | HRGMv2_4007_1 | HRGMv2_4007_1_42 | 49492 | 51759 | + | GH3 |
| pfam | HRGMv2_4007_1 | HRGMv2_4007_1_43 | 51771 | 52814 | + | DNA_pol3_delta |
| TC | HRGMv2_4007_1 | HRGMv2_4007_1_44 | 52829 | 53749 | + | 3.A.1.144.1 |
Gene ID: HRGMv2_4007_1_39
Type: TC
Location: 47551 - 48207 (+)
Type: TC
Location: 47551 - 48207 (+)
Gene ID: HRGMv2_4007_1_40
Type: pfam
Location: 48233 - 49207 (+)
Type: pfam
Location: 48233 - 49207 (+)
Gene ID: HRGMv2_4007_1_41
Type: pfam
Location: 49197 - 49490 (+)
Type: pfam
Location: 49197 - 49490 (+)
Gene ID: HRGMv2_4007_1_42
Type: CAZyme
Location: 49492 - 51759 (+)
Type: CAZyme
Location: 49492 - 51759 (+)
Gene ID: HRGMv2_4007_1_43
Type: pfam
Location: 51771 - 52814 (+)
Type: pfam
Location: 51771 - 52814 (+)
Gene ID: HRGMv2_4007_1_44
Type: TC
Location: 52829 - 53749 (+)
Type: TC
Location: 52829 - 53749 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.