Cluster: HRGMv2_4005_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4005
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4005_7 | HRGMv2_4005_7_9 | 9624 | 11879 | - | CBM35 |
| pfam | HRGMv2_4005_7 | HRGMv2_4005_7_10 | 12380 | 13651 | - | OEP | OEP |
| TC | HRGMv2_4005_7 | HRGMv2_4005_7_11 | 13659 | 16763 | - | 2.A.6.1.5 |
| pfam | HRGMv2_4005_7 | HRGMv2_4005_7_12 | 16789 | 17970 | - | HlyD_3 | HlyD_D23 |
| NULL(UNKNOWN) | HRGMv2_4005_7 | HRGMv2_4005_7_13 | 18154 | 18573 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4005_7 | HRGMv2_4005_7_14 | 18965 | 19933 | + | 2.A.19.5.2 |
Gene ID: HRGMv2_4005_7_9
Type: CAZyme
Location: 9624 - 11879 (-)
Type: CAZyme
Location: 9624 - 11879 (-)
Gene ID: HRGMv2_4005_7_10
Type: pfam
Location: 12380 - 13651 (-)
Type: pfam
Location: 12380 - 13651 (-)
Gene ID: HRGMv2_4005_7_11
Type: TC
Location: 13659 - 16763 (-)
Type: TC
Location: 13659 - 16763 (-)
Gene ID: HRGMv2_4005_7_12
Type: pfam
Location: 16789 - 17970 (-)
Type: pfam
Location: 16789 - 17970 (-)
Gene ID: HRGMv2_4005_7_13
Type:
Location: 18154 - 18573 (-)
Type:
Location: 18154 - 18573 (-)
Gene ID: HRGMv2_4005_7_14
Type: TC
Location: 18965 - 19933 (+)
Type: TC
Location: 18965 - 19933 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp022775985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.