dbCAN Logo

Cluster: HRGMv2_4001_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4001_24 HRGMv2_4001_24_3 3940 7059 + 1.B.14.6.1
sulfatase HRGMv2_4001_24 HRGMv2_4001_24_4 7126 8736 + S1_27
NULL(UNKNOWN) HRGMv2_4001_24 HRGMv2_4001_24_5 8859 9743 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4001_24 HRGMv2_4001_24_6 10057 11151 + GH16_3
CAZyme HRGMv2_4001_24 HRGMv2_4001_24_7 11156 12040 + GH16_3
CAZyme HRGMv2_4001_24 HRGMv2_4001_24_8 12037 14319 + GH3
CAZyme HRGMv2_4001_24 HRGMv2_4001_24_9 14351 15847 + GH128
Gene ID: HRGMv2_4001_24_3
Type: TC
Location: 3940 - 7059 (+)
Gene ID: HRGMv2_4001_24_4
Type: sulfatase
Location: 7126 - 8736 (+)
Gene ID: HRGMv2_4001_24_5
Type:
Location: 8859 - 9743 (+)
Gene ID: HRGMv2_4001_24_6
Type: CAZyme
Location: 10057 - 11151 (+)
Gene ID: HRGMv2_4001_24_7
Type: CAZyme
Location: 11156 - 12040 (+)
Gene ID: HRGMv2_4001_24_8
Type: CAZyme
Location: 12037 - 14319 (+)
Gene ID: HRGMv2_4001_24_9
Type: CAZyme
Location: 14351 - 15847 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List