Cluster: HRGMv2_4001_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_4001
- CGC Family ID: CGCFAM_00001
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4001_21 | HRGMv2_4001_21_9 | 13939 | 17004 | + | 1.B.14.6.1 |
| pfam | HRGMv2_4001_21 | HRGMv2_4001_21_10 | 17029 | 18543 | + | SusD_RagB | SusD-like_3 |
| CAZyme | HRGMv2_4001_21 | HRGMv2_4001_21_11 | 18659 | 20041 | + | GH144 |
| CAZyme | HRGMv2_4001_21 | HRGMv2_4001_21_12 | 20195 | 22516 | + | GH3 |
| TC | HRGMv2_4001_21 | HRGMv2_4001_21_13 | 22676 | 23683 | - | 2.A.98.1.3 |
Gene ID: HRGMv2_4001_21_9
Type: TC
Location: 13939 - 17004 (+)
Type: TC
Location: 13939 - 17004 (+)
Gene ID: HRGMv2_4001_21_10
Type: pfam
Location: 17029 - 18543 (+)
Type: pfam
Location: 17029 - 18543 (+)
Gene ID: HRGMv2_4001_21_11
Type: CAZyme
Location: 18659 - 20041 (+)
Type: CAZyme
Location: 18659 - 20041 (+)
Gene ID: HRGMv2_4001_21_12
Type: CAZyme
Location: 20195 - 22516 (+)
Type: CAZyme
Location: 20195 - 22516 (+)
Gene ID: HRGMv2_4001_21_13
Type: TC
Location: 22676 - 23683 (-)
Type: TC
Location: 22676 - 23683 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
UBA7173
Species
UBA7173 sp910584735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.