Cluster: HRGMv2_4001_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4001
- CGC Family ID: CGCFAM_03208
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4001_19 | HRGMv2_4001_19_17 | 19510 | 21279 | + | 3.A.1.120.5 |
| pfam | HRGMv2_4001_19 | HRGMv2_4001_19_18 | 21321 | 21926 | - | HAD |
| STP | HRGMv2_4001_19 | HRGMv2_4001_19_19 | 21971 | 22567 | - | Pribosyltran |
| CAZyme | HRGMv2_4001_19 | HRGMv2_4001_19_20 | 22586 | 23557 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4001_19 | HRGMv2_4001_19_21 | 23623 | 24066 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4001_19 | HRGMv2_4001_19_22 | 24182 | 26770 | - | 3.A.9.1.2 |
Gene ID: HRGMv2_4001_19_17
Type: TC
Location: 19510 - 21279 (+)
Type: TC
Location: 19510 - 21279 (+)
Gene ID: HRGMv2_4001_19_18
Type: pfam
Location: 21321 - 21926 (-)
Type: pfam
Location: 21321 - 21926 (-)
Gene ID: HRGMv2_4001_19_19
Type: STP
Location: 21971 - 22567 (-)
Type: STP
Location: 21971 - 22567 (-)
Gene ID: HRGMv2_4001_19_20
Type: CAZyme
Location: 22586 - 23557 (-)
Type: CAZyme
Location: 22586 - 23557 (-)
Gene ID: HRGMv2_4001_19_21
Type:
Location: 23623 - 24066 (-)
Type:
Location: 23623 - 24066 (-)
Gene ID: HRGMv2_4001_19_22
Type: TC
Location: 24182 - 26770 (-)
Type: TC
Location: 24182 - 26770 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
UBA7173
Species
UBA7173 sp910584735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.