Cluster: HRGMv2_4001_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4001
- CGC Family ID: CGCFAM_05191
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4001_11 | HRGMv2_4001_11_23 | 31956 | 32525 | - | 2.A.51.1.6 |
| TC | HRGMv2_4001_11 | HRGMv2_4001_11_24 | 32522 | 33157 | - | 2.A.51.1.5 |
| STP | HRGMv2_4001_11 | HRGMv2_4001_11_25 | 33489 | 35069 | + | HATPase_c | HisKA |
| TF | HRGMv2_4001_11 | HRGMv2_4001_11_26 | 35130 | 35837 | + | Trans_reg_C |
| CAZyme | HRGMv2_4001_11 | HRGMv2_4001_11_27 | 35992 | 37398 | + | GH13_28 |
| NULL(UNKNOWN) | HRGMv2_4001_11 | HRGMv2_4001_11_28 | 37503 | 37685 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4001_11 | HRGMv2_4001_11_29 | 37865 | 39286 | + | 9.B.126.2.2 |
Gene ID: HRGMv2_4001_11_23
Type: TC
Location: 31956 - 32525 (-)
Type: TC
Location: 31956 - 32525 (-)
Gene ID: HRGMv2_4001_11_24
Type: TC
Location: 32522 - 33157 (-)
Type: TC
Location: 32522 - 33157 (-)
Gene ID: HRGMv2_4001_11_25
Type: STP
Location: 33489 - 35069 (+)
Type: STP
Location: 33489 - 35069 (+)
Gene ID: HRGMv2_4001_11_26
Type: TF
Location: 35130 - 35837 (+)
Type: TF
Location: 35130 - 35837 (+)
Gene ID: HRGMv2_4001_11_27
Type: CAZyme
Location: 35992 - 37398 (+)
Type: CAZyme
Location: 35992 - 37398 (+)
Gene ID: HRGMv2_4001_11_28
Type:
Location: 37503 - 37685 (-)
Type:
Location: 37503 - 37685 (-)
Gene ID: HRGMv2_4001_11_29
Type: TC
Location: 37865 - 39286 (+)
Type: TC
Location: 37865 - 39286 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
UBA7173
Species
UBA7173 sp910584735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.