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Cluster: HRGMv2_4001_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4001_41 HRGMv2_4001_41_12 12044 13093 - 9.A.40.2.4
NULL(UNKNOWN) HRGMv2_4001_41 HRGMv2_4001_41_13 13229 13552 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4001_41 HRGMv2_4001_41_14 13602 14174 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4001_41 HRGMv2_4001_41_15 14288 15268 - CBM50
pfam HRGMv2_4001_41 HRGMv2_4001_41_16 15361 15828 - NDK
NULL(UNKNOWN) HRGMv2_4001_41 HRGMv2_4001_41_17 16074 16298 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4001_41 HRGMv2_4001_41_18 16495 17157 + 3.A.1.122.2
TC HRGMv2_4001_41 HRGMv2_4001_41_19 17165 18388 + 3.A.1.122.7
TC HRGMv2_4001_41 HRGMv2_4001_41_20 18381 19673 + 3.A.1.122.2
TC HRGMv2_4001_41 HRGMv2_4001_41_21 19725 20825 + 2.A.6.2.27
Gene ID: HRGMv2_4001_41_12
Type: TC
Location: 12044 - 13093 (-)
Gene ID: HRGMv2_4001_41_13
Type:
Location: 13229 - 13552 (-)
Gene ID: HRGMv2_4001_41_14
Type:
Location: 13602 - 14174 (-)
Gene ID: HRGMv2_4001_41_15
Type: CAZyme
Location: 14288 - 15268 (-)
Gene ID: HRGMv2_4001_41_16
Type: pfam
Location: 15361 - 15828 (-)
Gene ID: HRGMv2_4001_41_17
Type:
Location: 16074 - 16298 (-)
Gene ID: HRGMv2_4001_41_18
Type: TC
Location: 16495 - 17157 (+)
Gene ID: HRGMv2_4001_41_19
Type: TC
Location: 17165 - 18388 (+)
Gene ID: HRGMv2_4001_41_20
Type: TC
Location: 18381 - 19673 (+)
Gene ID: HRGMv2_4001_41_21
Type: TC
Location: 19725 - 20825 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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