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Cluster: HRGMv2_3998_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3998_198 HRGMv2_3998_198_8 7164 8096 + 9.B.146.1.3
TC HRGMv2_3998_198 HRGMv2_3998_198_9 8075 8425 + 9.B.146.1.3
pfam HRGMv2_3998_198 HRGMv2_3998_198_10 8443 9282 + Mur_ligase_M | MurD_N | MurD-like_N
pfam HRGMv2_3998_198 HRGMv2_3998_198_11 9245 9802 + Mur_ligase_C
TC HRGMv2_3998_198 HRGMv2_3998_198_12 9817 11106 + 2.A.103.1.3
CAZyme HRGMv2_3998_198 HRGMv2_3998_198_13 11117 12238 + GT28
Gene ID: HRGMv2_3998_198_8
Type: TC
Location: 7164 - 8096 (+)
Gene ID: HRGMv2_3998_198_9
Type: TC
Location: 8075 - 8425 (+)
Gene ID: HRGMv2_3998_198_10
Type: pfam
Location: 8443 - 9282 (+)
Gene ID: HRGMv2_3998_198_11
Type: pfam
Location: 9245 - 9802 (+)
Gene ID: HRGMv2_3998_198_12
Type: TC
Location: 9817 - 11106 (+)
Gene ID: HRGMv2_3998_198_13
Type: CAZyme
Location: 11117 - 12238 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Paramuribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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