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Cluster: HRGMv2_3998_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3998_163 HRGMv2_3998_163_4 2363 3664 - 2.A.6.2.30
pfam HRGMv2_3998_163 HRGMv2_3998_163_5 3671 4738 - HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC HRGMv2_3998_163 HRGMv2_3998_163_6 4781 6028 - 3.A.1.122.1
TC HRGMv2_3998_163 HRGMv2_3998_163_7 6165 7250 - 3.A.1.122.3
TC HRGMv2_3998_163 HRGMv2_3998_163_8 7254 7919 - 3.A.1.122.2
CAZyme HRGMv2_3998_163 HRGMv2_3998_163_9 8570 10513 + GH133
CAZyme HRGMv2_3998_163 HRGMv2_3998_163_10 10550 11800 + GT4
CAZyme HRGMv2_3998_163 HRGMv2_3998_163_11 12372 13349 + GH57
TC HRGMv2_3998_163 HRGMv2_3998_163_12 13392 14705 + 1.I.1.1.3
Gene ID: HRGMv2_3998_163_4
Type: TC
Location: 2363 - 3664 (-)
Gene ID: HRGMv2_3998_163_5
Type: pfam
Location: 3671 - 4738 (-)
Gene ID: HRGMv2_3998_163_6
Type: TC
Location: 4781 - 6028 (-)
Gene ID: HRGMv2_3998_163_7
Type: TC
Location: 6165 - 7250 (-)
Gene ID: HRGMv2_3998_163_8
Type: TC
Location: 7254 - 7919 (-)
Gene ID: HRGMv2_3998_163_9
Type: CAZyme
Location: 8570 - 10513 (+)
Gene ID: HRGMv2_3998_163_10
Type: CAZyme
Location: 10550 - 11800 (+)
Gene ID: HRGMv2_3998_163_11
Type: CAZyme
Location: 12372 - 13349 (+)
Gene ID: HRGMv2_3998_163_12
Type: TC
Location: 13392 - 14705 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Paramuribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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