Cluster: HRGMv2_3998_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3998
- CGC Family ID: CGCFAM_06254
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3998_131 | HRGMv2_3998_131_15 | 13790 | 15685 | - | GH2 |
| pfam | HRGMv2_3998_131 | HRGMv2_3998_131_16 | 15791 | 16759 | + | Formyl_trans_N | Formyl_trans_C |
| peptidase | HRGMv2_3998_131 | HRGMv2_3998_131_17 | 16787 | 18676 | - | M06.UPW |
| CAZyme | HRGMv2_3998_131 | HRGMv2_3998_131_18 | 18788 | 19504 | + | GT32 |
| CAZyme | HRGMv2_3998_131 | HRGMv2_3998_131_19 | 19494 | 20525 | - | GT113 |
| pfam | HRGMv2_3998_131 | HRGMv2_3998_131_20 | 20613 | 21728 | - | Gp_dh_N | Gp_dh_C |
| TC | HRGMv2_3998_131 | HRGMv2_3998_131_21 | 21872 | 22306 | + | 1.A.22.1.1 |
Gene ID: HRGMv2_3998_131_15
Type: CAZyme
Location: 13790 - 15685 (-)
Type: CAZyme
Location: 13790 - 15685 (-)
Gene ID: HRGMv2_3998_131_16
Type: pfam
Location: 15791 - 16759 (+)
Type: pfam
Location: 15791 - 16759 (+)
Gene ID: HRGMv2_3998_131_17
Type: peptidase
Location: 16787 - 18676 (-)
Type: peptidase
Location: 16787 - 18676 (-)
Gene ID: HRGMv2_3998_131_18
Type: CAZyme
Location: 18788 - 19504 (+)
Type: CAZyme
Location: 18788 - 19504 (+)
Gene ID: HRGMv2_3998_131_19
Type: CAZyme
Location: 19494 - 20525 (-)
Type: CAZyme
Location: 19494 - 20525 (-)
Gene ID: HRGMv2_3998_131_20
Type: pfam
Location: 20613 - 21728 (-)
Type: pfam
Location: 20613 - 21728 (-)
Gene ID: HRGMv2_3998_131_21
Type: TC
Location: 21872 - 22306 (+)
Type: TC
Location: 21872 - 22306 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Paramuribaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.