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Cluster: HRGMv2_3996_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3996_199 HRGMv2_3996_199_31 29453 29803 + 3.D.1.8.1
TC HRGMv2_3996_199 HRGMv2_3996_199_32 29794 30666 + 3.D.9.1.1
TC HRGMv2_3996_199 HRGMv2_3996_199_33 30678 32249 + 3.D.1.5.1
TC HRGMv2_3996_199 HRGMv2_3996_199_34 32293 33387 + 3.D.1.5.1
STP HRGMv2_3996_199 HRGMv2_3996_199_35 33405 33974 + Fer4 | Fer4
pfam HRGMv2_3996_199 HRGMv2_3996_199_36 33974 34501 + Oxidored_q3
TC HRGMv2_3996_199 HRGMv2_3996_199_37 34498 34809 + 3.D.9.1.1
TC HRGMv2_3996_199 HRGMv2_3996_199_38 34818 36806 + 3.D.1.2.1
TC HRGMv2_3996_199 HRGMv2_3996_199_39 36813 38333 + 3.D.1.5.1
TC HRGMv2_3996_199 HRGMv2_3996_199_40 38360 39154 + 3.D.1.2.1
TC HRGMv2_3996_199 HRGMv2_3996_199_41 39154 39831 + 3.D.1.8.1
NULL(UNKNOWN) HRGMv2_3996_199 HRGMv2_3996_199_42 41009 41413 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3996_199 HRGMv2_3996_199_43 41428 41835 + DUF1232
CAZyme HRGMv2_3996_199 HRGMv2_3996_199_44 41886 42929 - GT27
Gene ID: HRGMv2_3996_199_31
Type: TC
Location: 29453 - 29803 (+)
Gene ID: HRGMv2_3996_199_32
Type: TC
Location: 29794 - 30666 (+)
Gene ID: HRGMv2_3996_199_33
Type: TC
Location: 30678 - 32249 (+)
Gene ID: HRGMv2_3996_199_34
Type: TC
Location: 32293 - 33387 (+)
Gene ID: HRGMv2_3996_199_35
Type: STP
Location: 33405 - 33974 (+)
Gene ID: HRGMv2_3996_199_36
Type: pfam
Location: 33974 - 34501 (+)
Gene ID: HRGMv2_3996_199_37
Type: TC
Location: 34498 - 34809 (+)
Gene ID: HRGMv2_3996_199_38
Type: TC
Location: 34818 - 36806 (+)
Gene ID: HRGMv2_3996_199_39
Type: TC
Location: 36813 - 38333 (+)
Gene ID: HRGMv2_3996_199_40
Type: TC
Location: 38360 - 39154 (+)
Gene ID: HRGMv2_3996_199_41
Type: TC
Location: 39154 - 39831 (+)
Gene ID: HRGMv2_3996_199_42
Type:
Location: 41009 - 41413 (+)
Gene ID: HRGMv2_3996_199_43
Type: pfam
Location: 41428 - 41835 (+)
Gene ID: HRGMv2_3996_199_44
Type: CAZyme
Location: 41886 - 42929 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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