Cluster: HRGMv2_3996_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3996
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3996_198 | HRGMv2_3996_198_1 | 96 | 1070 | + | GH16_3 |
| TC | HRGMv2_3996_198 | HRGMv2_3996_198_2 | 1088 | 3994 | + | 1.B.14.6.2 |
| NULL(UNKNOWN) | HRGMv2_3996_198 | HRGMv2_3996_198_3 | 3991 | 4272 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3996_198 | HRGMv2_3996_198_4 | 4304 | 5977 | + | 8.A.46.2.2 |
| NULL(UNKNOWN) | HRGMv2_3996_198 | HRGMv2_3996_198_5 | 6002 | 7264 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3996_198 | HRGMv2_3996_198_6 | 7380 | 9686 | + | GH3 |
Gene ID: HRGMv2_3996_198_1
Type: CAZyme
Location: 96 - 1070 (+)
Type: CAZyme
Location: 96 - 1070 (+)
Gene ID: HRGMv2_3996_198_2
Type: TC
Location: 1088 - 3994 (+)
Type: TC
Location: 1088 - 3994 (+)
Gene ID: HRGMv2_3996_198_3
Type:
Location: 3991 - 4272 (+)
Type:
Location: 3991 - 4272 (+)
Gene ID: HRGMv2_3996_198_4
Type: TC
Location: 4304 - 5977 (+)
Type: TC
Location: 4304 - 5977 (+)
Gene ID: HRGMv2_3996_198_5
Type:
Location: 6002 - 7264 (+)
Type:
Location: 6002 - 7264 (+)
Gene ID: HRGMv2_3996_198_6
Type: CAZyme
Location: 7380 - 9686 (+)
Type: CAZyme
Location: 7380 - 9686 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900322035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.