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Cluster: HRGMv2_3996_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3996_118 HRGMv2_3996_118_2 199 1239 + GH26
CAZyme HRGMv2_3996_118 HRGMv2_3996_118_3 1358 2530 + GH130_1
TC HRGMv2_3996_118 HRGMv2_3996_118_4 2676 4025 + 2.A.2.3.7
pfam HRGMv2_3996_118 HRGMv2_3996_118_5 4122 5321 + GlcNAc_2-epim
CAZyme HRGMv2_3996_118 HRGMv2_3996_118_6 5426 6670 + GH2
CAZyme HRGMv2_3996_118 HRGMv2_3996_118_7 6687 8879 + GH3
TC HRGMv2_3996_118 HRGMv2_3996_118_8 8984 10156 + 2.A.1.1.3
Gene ID: HRGMv2_3996_118_2
Type: CAZyme
Location: 199 - 1239 (+)
Gene ID: HRGMv2_3996_118_3
Type: CAZyme
Location: 1358 - 2530 (+)
Gene ID: HRGMv2_3996_118_4
Type: TC
Location: 2676 - 4025 (+)
Gene ID: HRGMv2_3996_118_5
Type: pfam
Location: 4122 - 5321 (+)
Gene ID: HRGMv2_3996_118_6
Type: CAZyme
Location: 5426 - 6670 (+)
Gene ID: HRGMv2_3996_118_7
Type: CAZyme
Location: 6687 - 8879 (+)
Gene ID: HRGMv2_3996_118_8
Type: TC
Location: 8984 - 10156 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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