dbCAN Logo

Cluster: HRGMv2_3995_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3995_60 HRGMv2_3995_60_10 8145 9089 + 1.A.26.1.1
NULL(UNKNOWN) HRGMv2_3995_60 HRGMv2_3995_60_11 9116 9598 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3995_60 HRGMv2_3995_60_12 9496 9993 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3995_60 HRGMv2_3995_60_13 10416 11048 - GH92
pfam HRGMv2_3995_60 HRGMv2_3995_60_14 11045 11485 - Glyco_hydro_92
pfam HRGMv2_3995_60 HRGMv2_3995_60_15 11521 12627 - Glyco_hydro_92 | Glyco_hydro_92N
CAZyme HRGMv2_3995_60 HRGMv2_3995_60_16 12646 14787 - GH36
CAZyme HRGMv2_3995_60 HRGMv2_3995_60_17 14823 15488 - CE20
CAZyme HRGMv2_3995_60 HRGMv2_3995_60_18 15488 16741 - CE20
Gene ID: HRGMv2_3995_60_10
Type: TC
Location: 8145 - 9089 (+)
Gene ID: HRGMv2_3995_60_11
Type:
Location: 9116 - 9598 (+)
Gene ID: HRGMv2_3995_60_12
Type:
Location: 9496 - 9993 (-)
Gene ID: HRGMv2_3995_60_13
Type: CAZyme
Location: 10416 - 11048 (-)
Gene ID: HRGMv2_3995_60_14
Type: pfam
Location: 11045 - 11485 (-)
Gene ID: HRGMv2_3995_60_15
Type: pfam
Location: 11521 - 12627 (-)
Gene ID: HRGMv2_3995_60_16
Type: CAZyme
Location: 12646 - 14787 (-)
Gene ID: HRGMv2_3995_60_17
Type: CAZyme
Location: 14823 - 15488 (-)
Gene ID: HRGMv2_3995_60_18
Type: CAZyme
Location: 15488 - 16741 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List