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Cluster: HRGMv2_3995_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3995_53 HRGMv2_3995_53_5 2322 6962 - GH53
NULL(UNKNOWN) HRGMv2_3995_53 HRGMv2_3995_53_6 7050 7898 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3995_53 HRGMv2_3995_53_7 7972 10437 - GH2
CAZyme HRGMv2_3995_53 HRGMv2_3995_53_8 10427 12013 - GH30_4
pfam HRGMv2_3995_53 HRGMv2_3995_53_9 12041 12367 - SusD_RagB
TC HRGMv2_3995_53 HRGMv2_3995_53_10 12379 13641 - 8.A.46.1.3
TC HRGMv2_3995_53 HRGMv2_3995_53_11 13682 15820 - 1.B.14.6.1
TC HRGMv2_3995_53 HRGMv2_3995_53_12 15961 16677 - 1.B.14.6.1
Gene ID: HRGMv2_3995_53_5
Type: CAZyme
Location: 2322 - 6962 (-)
Gene ID: HRGMv2_3995_53_6
Type:
Location: 7050 - 7898 (-)
Gene ID: HRGMv2_3995_53_7
Type: CAZyme
Location: 7972 - 10437 (-)
Gene ID: HRGMv2_3995_53_8
Type: CAZyme
Location: 10427 - 12013 (-)
Gene ID: HRGMv2_3995_53_9
Type: pfam
Location: 12041 - 12367 (-)
Gene ID: HRGMv2_3995_53_10
Type: TC
Location: 12379 - 13641 (-)
Gene ID: HRGMv2_3995_53_11
Type: TC
Location: 13682 - 15820 (-)
Gene ID: HRGMv2_3995_53_12
Type: TC
Location: 15961 - 16677 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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