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Cluster: HRGMv2_3995_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3995_32 HRGMv2_3995_32_9 6888 8423 - GH32
pfam HRGMv2_3995_32 HRGMv2_3995_32_10 8420 9802 - DUF4960
TC HRGMv2_3995_32 HRGMv2_3995_32_11 9815 11563 - 8.A.46.1.3
NULL(UNKNOWN) HRGMv2_3995_32 HRGMv2_3995_32_12 11592 12017 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3995_32 HRGMv2_3995_32_13 12053 12352 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3995_32 HRGMv2_3995_32_14 12349 13113 - 1.B.14.6.1
TC HRGMv2_3995_32 HRGMv2_3995_32_15 13104 14681 - 1.B.14.6.1
Gene ID: HRGMv2_3995_32_9
Type: CAZyme
Location: 6888 - 8423 (-)
Gene ID: HRGMv2_3995_32_10
Type: pfam
Location: 8420 - 9802 (-)
Gene ID: HRGMv2_3995_32_11
Type: TC
Location: 9815 - 11563 (-)
Gene ID: HRGMv2_3995_32_12
Type:
Location: 11592 - 12017 (-)
Gene ID: HRGMv2_3995_32_13
Type:
Location: 12053 - 12352 (-)
Gene ID: HRGMv2_3995_32_14
Type: TC
Location: 12349 - 13113 (-)
Gene ID: HRGMv2_3995_32_15
Type: TC
Location: 13104 - 14681 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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