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Cluster: HRGMv2_3995_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3995_210 HRGMv2_3995_210_8 7745 7996 + 2.A.103.1.2
pfam HRGMv2_3995_210 HRGMv2_3995_210_9 8100 8894 + Patatin
CAZyme HRGMv2_3995_210 HRGMv2_3995_210_10 8924 10720 + GH13_38
STP HRGMv2_3995_210 HRGMv2_3995_210_11 10764 11705 + Pribosyltran
TC HRGMv2_3995_210 HRGMv2_3995_210_12 11715 13757 + 1.B.14.15.2
TC HRGMv2_3995_210 HRGMv2_3995_210_13 13741 14943 + 2.A.1.2.14
pfam HRGMv2_3995_210 HRGMv2_3995_210_14 15130 15288 - Bgal_small_N
CAZyme HRGMv2_3995_210 HRGMv2_3995_210_15 15270 18200 - GH2
Gene ID: HRGMv2_3995_210_8
Type: TC
Location: 7745 - 7996 (+)
Gene ID: HRGMv2_3995_210_9
Type: pfam
Location: 8100 - 8894 (+)
Gene ID: HRGMv2_3995_210_10
Type: CAZyme
Location: 8924 - 10720 (+)
Gene ID: HRGMv2_3995_210_11
Type: STP
Location: 10764 - 11705 (+)
Gene ID: HRGMv2_3995_210_12
Type: TC
Location: 11715 - 13757 (+)
Gene ID: HRGMv2_3995_210_13
Type: TC
Location: 13741 - 14943 (+)
Gene ID: HRGMv2_3995_210_14
Type: pfam
Location: 15130 - 15288 (-)
Gene ID: HRGMv2_3995_210_15
Type: CAZyme
Location: 15270 - 18200 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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