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Cluster: HRGMv2_3995_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3995_186 HRGMv2_3995_186_2 719 2032 + 9.A.40.1.1
NULL(UNKNOWN) HRGMv2_3995_186 HRGMv2_3995_186_3 2420 2734 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3995_186 HRGMv2_3995_186_4 2832 3722 + Exo_endo_phos_3
TC HRGMv2_3995_186 HRGMv2_3995_186_5 4133 5563 + 2.A.35.1.2
NULL(UNKNOWN) HRGMv2_3995_186 HRGMv2_3995_186_6 5743 6105 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3995_186 HRGMv2_3995_186_7 6102 6572 + DUF308
CAZyme HRGMv2_3995_186 HRGMv2_3995_186_8 7235 9205 + GH31_15
TC HRGMv2_3995_186 HRGMv2_3995_186_9 9186 9815 - 2.A.115.2.14
Gene ID: HRGMv2_3995_186_2
Type: TC
Location: 719 - 2032 (+)
Gene ID: HRGMv2_3995_186_3
Type:
Location: 2420 - 2734 (+)
Gene ID: HRGMv2_3995_186_4
Type: pfam
Location: 2832 - 3722 (+)
Gene ID: HRGMv2_3995_186_5
Type: TC
Location: 4133 - 5563 (+)
Gene ID: HRGMv2_3995_186_6
Type:
Location: 5743 - 6105 (+)
Gene ID: HRGMv2_3995_186_7
Type: pfam
Location: 6102 - 6572 (+)
Gene ID: HRGMv2_3995_186_8
Type: CAZyme
Location: 7235 - 9205 (+)
Gene ID: HRGMv2_3995_186_9
Type: TC
Location: 9186 - 9815 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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