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Cluster: HRGMv2_3995_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3995_136 HRGMv2_3995_136_3 1255 3069 - GT83
pfam HRGMv2_3995_136 HRGMv2_3995_136_4 3094 3660 - tRNA_edit
CAZyme HRGMv2_3995_136 HRGMv2_3995_136_5 3831 4619 + CE4
CAZyme HRGMv2_3995_136 HRGMv2_3995_136_6 4616 5560 + GT2
pfam HRGMv2_3995_136 HRGMv2_3995_136_7 5631 5870 + Cation_ATPase_N
TC HRGMv2_3995_136 HRGMv2_3995_136_8 5975 6256 + 3.A.3.2.26
TC HRGMv2_3995_136 HRGMv2_3995_136_9 6220 8337 + 3.A.3.2.17
Gene ID: HRGMv2_3995_136_3
Type: CAZyme
Location: 1255 - 3069 (-)
Gene ID: HRGMv2_3995_136_4
Type: pfam
Location: 3094 - 3660 (-)
Gene ID: HRGMv2_3995_136_5
Type: CAZyme
Location: 3831 - 4619 (+)
Gene ID: HRGMv2_3995_136_6
Type: CAZyme
Location: 4616 - 5560 (+)
Gene ID: HRGMv2_3995_136_7
Type: pfam
Location: 5631 - 5870 (+)
Gene ID: HRGMv2_3995_136_8
Type: TC
Location: 5975 - 6256 (+)
Gene ID: HRGMv2_3995_136_9
Type: TC
Location: 6220 - 8337 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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