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Cluster: HRGMv2_3995_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3995_118 HRGMv2_3995_118_6 7653 10145 + GH3
pfam HRGMv2_3995_118 HRGMv2_3995_118_7 10246 11835 - OMP_b-brl_3
pfam HRGMv2_3995_118 HRGMv2_3995_118_8 11844 12548 - Plug | CarboxypepD_reg | CarbopepD_reg_2
TC HRGMv2_3995_118 HRGMv2_3995_118_9 12768 13478 - 3.A.1.23.8
pfam HRGMv2_3995_118 HRGMv2_3995_118_10 13564 14295 - CbiQ
TC HRGMv2_3995_118 HRGMv2_3995_118_11 14316 15296 - 3.A.1.23.5
TC HRGMv2_3995_118 HRGMv2_3995_118_12 15360 16736 - 2.A.1.1.95
TC HRGMv2_3995_118 HRGMv2_3995_118_13 16745 17764 - 1.A.28.1.4
Gene ID: HRGMv2_3995_118_6
Type: CAZyme
Location: 7653 - 10145 (+)
Gene ID: HRGMv2_3995_118_7
Type: pfam
Location: 10246 - 11835 (-)
Gene ID: HRGMv2_3995_118_8
Type: pfam
Location: 11844 - 12548 (-)
Gene ID: HRGMv2_3995_118_9
Type: TC
Location: 12768 - 13478 (-)
Gene ID: HRGMv2_3995_118_10
Type: pfam
Location: 13564 - 14295 (-)
Gene ID: HRGMv2_3995_118_11
Type: TC
Location: 14316 - 15296 (-)
Gene ID: HRGMv2_3995_118_12
Type: TC
Location: 15360 - 16736 (-)
Gene ID: HRGMv2_3995_118_13
Type: TC
Location: 16745 - 17764 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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