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Cluster: HRGMv2_3995_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3995_83 HRGMv2_3995_83_27 20602 20988 - GT2
pfam HRGMv2_3995_83 HRGMv2_3995_83_28 20975 21928 - Wzy_C
NULL(UNKNOWN) HRGMv2_3995_83 HRGMv2_3995_83_29 22215 22694 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3995_83 HRGMv2_3995_83_30 22634 23653 - 2.A.66.2.23
pfam HRGMv2_3995_83 HRGMv2_3995_83_31 23693 24058 - Hexapep_2 | Hexapep_2
NULL(UNKNOWN) HRGMv2_3995_83 HRGMv2_3995_83_32 24052 24228 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3995_83 HRGMv2_3995_83_33 24225 25037 - GT4
Gene ID: HRGMv2_3995_83_27
Type: CAZyme
Location: 20602 - 20988 (-)
Gene ID: HRGMv2_3995_83_28
Type: pfam
Location: 20975 - 21928 (-)
Gene ID: HRGMv2_3995_83_29
Type:
Location: 22215 - 22694 (-)
Gene ID: HRGMv2_3995_83_30
Type: TC
Location: 22634 - 23653 (-)
Gene ID: HRGMv2_3995_83_31
Type: pfam
Location: 23693 - 24058 (-)
Gene ID: HRGMv2_3995_83_32
Type:
Location: 24052 - 24228 (-)
Gene ID: HRGMv2_3995_83_33
Type: CAZyme
Location: 24225 - 25037 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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