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Cluster: HRGMv2_3992_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3992_21 HRGMv2_3992_21_4 2026 4137 + GH127
CAZyme HRGMv2_3992_21 HRGMv2_3992_21_5 4134 5924 + GH141
TC HRGMv2_3992_21 HRGMv2_3992_21_6 6232 7599 + 2.A.1.1.74
pfam HRGMv2_3992_21 HRGMv2_3992_21_7 7583 8608 + Bac_rhamnosid6H | Bac_rhamnosid-like_N
CAZyme HRGMv2_3992_21 HRGMv2_3992_21_8 8602 9669 + GH78
CAZyme HRGMv2_3992_21 HRGMv2_3992_21_9 9666 12311 + GH138
CAZyme HRGMv2_3992_21 HRGMv2_3992_21_10 12321 16430 + CBM57 | CBM97 | GH137 | GH2
Gene ID: HRGMv2_3992_21_4
Type: CAZyme
Location: 2026 - 4137 (+)
Gene ID: HRGMv2_3992_21_5
Type: CAZyme
Location: 4134 - 5924 (+)
Gene ID: HRGMv2_3992_21_6
Type: TC
Location: 6232 - 7599 (+)
Gene ID: HRGMv2_3992_21_7
Type: pfam
Location: 7583 - 8608 (+)
Gene ID: HRGMv2_3992_21_8
Type: CAZyme
Location: 8602 - 9669 (+)
Gene ID: HRGMv2_3992_21_9
Type: CAZyme
Location: 9666 - 12311 (+)
Gene ID: HRGMv2_3992_21_10
Type: CAZyme
Location: 12321 - 16430 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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