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Cluster: HRGMv2_3992_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3992_173 HRGMv2_3992_173_15 14049 15224 + 2.A.23.2.11
pfam HRGMv2_3992_173 HRGMv2_3992_173_16 15293 15829 - Lysine_decarbox | LDcluster4
pfam HRGMv2_3992_173 HRGMv2_3992_173_17 15907 17610 - DUF6377
CAZyme HRGMv2_3992_173 HRGMv2_3992_173_18 17824 20085 - GH3
CAZyme HRGMv2_3992_173 HRGMv2_3992_173_19 20159 22420 - GH3
CAZyme HRGMv2_3992_173 HRGMv2_3992_173_20 22437 23660 - GH5_46
CAZyme HRGMv2_3992_173 HRGMv2_3992_173_21 23771 24877 - GH16_3
Gene ID: HRGMv2_3992_173_15
Type: TC
Location: 14049 - 15224 (+)
Gene ID: HRGMv2_3992_173_16
Type: pfam
Location: 15293 - 15829 (-)
Gene ID: HRGMv2_3992_173_17
Type: pfam
Location: 15907 - 17610 (-)
Gene ID: HRGMv2_3992_173_18
Type: CAZyme
Location: 17824 - 20085 (-)
Gene ID: HRGMv2_3992_173_19
Type: CAZyme
Location: 20159 - 22420 (-)
Gene ID: HRGMv2_3992_173_20
Type: CAZyme
Location: 22437 - 23660 (-)
Gene ID: HRGMv2_3992_173_21
Type: CAZyme
Location: 23771 - 24877 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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