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Cluster: HRGMv2_3992_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3992_145 HRGMv2_3992_145_3 816 1784 - CE8
STP HRGMv2_3992_145 HRGMv2_3992_145_4 1832 4105 - HD
CAZyme HRGMv2_3992_145 HRGMv2_3992_145_5 4163 5488 - GH23
pfam HRGMv2_3992_145 HRGMv2_3992_145_6 5537 6322 - DUF5683
pfam HRGMv2_3992_145 HRGMv2_3992_145_7 6327 7226 - ParBc | HTH_ParB | ParB_dimer
TC HRGMv2_3992_145 HRGMv2_3992_145_8 7264 8028 - 8.A.3.2.3
pfam HRGMv2_3992_145 HRGMv2_3992_145_9 8246 9040 + SurE
CAZyme HRGMv2_3992_145 HRGMv2_3992_145_10 9099 10244 + GT19
Gene ID: HRGMv2_3992_145_3
Type: CAZyme
Location: 816 - 1784 (-)
Gene ID: HRGMv2_3992_145_4
Type: STP
Location: 1832 - 4105 (-)
Gene ID: HRGMv2_3992_145_5
Type: CAZyme
Location: 4163 - 5488 (-)
Gene ID: HRGMv2_3992_145_6
Type: pfam
Location: 5537 - 6322 (-)
Gene ID: HRGMv2_3992_145_7
Type: pfam
Location: 6327 - 7226 (-)
Gene ID: HRGMv2_3992_145_8
Type: TC
Location: 7264 - 8028 (-)
Gene ID: HRGMv2_3992_145_9
Type: pfam
Location: 8246 - 9040 (+)
Gene ID: HRGMv2_3992_145_10
Type: CAZyme
Location: 9099 - 10244 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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