Cluster: HRGMv2_3992_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3992
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3992_17 | HRGMv2_3992_17_2 | 2344 | 3081 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_3992_17 | HRGMv2_3992_17_3 | 3100 | 3270 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3992_17 | HRGMv2_3992_17_4 | 3285 | 4673 | - | GT83 |
| peptidase | HRGMv2_3992_17 | HRGMv2_3992_17_5 | 4933 | 6990 | - | M06.UPW |
| peptidase | HRGMv2_3992_17 | HRGMv2_3992_17_6 | 6954 | 7640 | - | M06.UPW |
| TC | HRGMv2_3992_17 | HRGMv2_3992_17_7 | 8494 | 9684 | + | 1.A.23.4.5 |
Gene ID: HRGMv2_3992_17_2
Type: CAZyme
Location: 2344 - 3081 (-)
Type: CAZyme
Location: 2344 - 3081 (-)
Gene ID: HRGMv2_3992_17_3
Type:
Location: 3100 - 3270 (-)
Type:
Location: 3100 - 3270 (-)
Gene ID: HRGMv2_3992_17_4
Type: CAZyme
Location: 3285 - 4673 (-)
Type: CAZyme
Location: 3285 - 4673 (-)
Gene ID: HRGMv2_3992_17_5
Type: peptidase
Location: 4933 - 6990 (-)
Type: peptidase
Location: 4933 - 6990 (-)
Gene ID: HRGMv2_3992_17_6
Type: peptidase
Location: 6954 - 7640 (-)
Type: peptidase
Location: 6954 - 7640 (-)
Gene ID: HRGMv2_3992_17_7
Type: TC
Location: 8494 - 9684 (+)
Type: TC
Location: 8494 - 9684 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp902491375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.