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Cluster: HRGMv2_3991_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3991_97 HRGMv2_3991_97_7 11047 12558 + GH5_4
STP HRGMv2_3991_97 HRGMv2_3991_97_8 12718 15054 + Reg_prop
TF HRGMv2_3991_97 HRGMv2_3991_97_9 15039 15821 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_3991_97 HRGMv2_3991_97_10 15922 18885 + GH31_4
TC HRGMv2_3991_97 HRGMv2_3991_97_11 19112 19588 + 1.E.14.1.13
TC HRGMv2_3991_97 HRGMv2_3991_97_12 19585 20295 + 2.A.122.1.1
CAZyme HRGMv2_3991_97 HRGMv2_3991_97_13 20443 22872 + GH2
CAZyme HRGMv2_3991_97 HRGMv2_3991_97_14 22915 25161 + GH3
Gene ID: HRGMv2_3991_97_7
Type: CAZyme
Location: 11047 - 12558 (+)
Gene ID: HRGMv2_3991_97_8
Type: STP
Location: 12718 - 15054 (+)
Gene ID: HRGMv2_3991_97_9
Type: TF
Location: 15039 - 15821 (+)
Gene ID: HRGMv2_3991_97_10
Type: CAZyme
Location: 15922 - 18885 (+)
Gene ID: HRGMv2_3991_97_11
Type: TC
Location: 19112 - 19588 (+)
Gene ID: HRGMv2_3991_97_12
Type: TC
Location: 19585 - 20295 (+)
Gene ID: HRGMv2_3991_97_13
Type: CAZyme
Location: 20443 - 22872 (+)
Gene ID: HRGMv2_3991_97_14
Type: CAZyme
Location: 22915 - 25161 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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