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Cluster: HRGMv2_3991_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3991_91 HRGMv2_3991_91_12 11261 12457 + CE19
NULL(UNKNOWN) HRGMv2_3991_91 HRGMv2_3991_91_13 12460 12651 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3991_91 HRGMv2_3991_91_14 12709 14589 + 3.A.18.1.1
CAZyme HRGMv2_3991_91 HRGMv2_3991_91_15 14660 17539 - GH2
peptidase HRGMv2_3991_91 HRGMv2_3991_91_16 17565 19649 - S46.UPW
pfam HRGMv2_3991_91 HRGMv2_3991_91_17 19676 21175 - Polysacc_synt | Polysacc_synt_3
TC HRGMv2_3991_91 HRGMv2_3991_91_18 21181 22413 - 9.B.156.3.1
Gene ID: HRGMv2_3991_91_12
Type: CAZyme
Location: 11261 - 12457 (+)
Gene ID: HRGMv2_3991_91_13
Type:
Location: 12460 - 12651 (+)
Gene ID: HRGMv2_3991_91_14
Type: TC
Location: 12709 - 14589 (+)
Gene ID: HRGMv2_3991_91_15
Type: CAZyme
Location: 14660 - 17539 (-)
Gene ID: HRGMv2_3991_91_16
Type: peptidase
Location: 17565 - 19649 (-)
Gene ID: HRGMv2_3991_91_17
Type: pfam
Location: 19676 - 21175 (-)
Gene ID: HRGMv2_3991_91_18
Type: TC
Location: 21181 - 22413 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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