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Cluster: HRGMv2_3991_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3991_65 HRGMv2_3991_65_28 30124 31104 - GT90
pfam HRGMv2_3991_65 HRGMv2_3991_65_29 31113 31844 - Glyco_transf_25
CAZyme HRGMv2_3991_65 HRGMv2_3991_65_30 31852 32607 - GT32
CAZyme HRGMv2_3991_65 HRGMv2_3991_65_31 32736 33911 + GT4
pfam HRGMv2_3991_65 HRGMv2_3991_65_32 34817 36739 + Sulfatase
pfam HRGMv2_3991_65 HRGMv2_3991_65_33 36756 38732 - Sulfatase
TC HRGMv2_3991_65 HRGMv2_3991_65_34 38762 39550 - 2.A.5.5.2
CAZyme HRGMv2_3991_65 HRGMv2_3991_65_35 39697 42174 + GH94
Gene ID: HRGMv2_3991_65_28
Type: CAZyme
Location: 30124 - 31104 (-)
Gene ID: HRGMv2_3991_65_29
Type: pfam
Location: 31113 - 31844 (-)
Gene ID: HRGMv2_3991_65_30
Type: CAZyme
Location: 31852 - 32607 (-)
Gene ID: HRGMv2_3991_65_31
Type: CAZyme
Location: 32736 - 33911 (+)
Gene ID: HRGMv2_3991_65_32
Type: pfam
Location: 34817 - 36739 (+)
Gene ID: HRGMv2_3991_65_33
Type: pfam
Location: 36756 - 38732 (-)
Gene ID: HRGMv2_3991_65_34
Type: TC
Location: 38762 - 39550 (-)
Gene ID: HRGMv2_3991_65_35
Type: CAZyme
Location: 39697 - 42174 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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