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Cluster: HRGMv2_3990_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3990_210 HRGMv2_3990_210_2 654 1472 - CE8
STP HRGMv2_3990_210 HRGMv2_3990_210_3 1727 4000 - HD
CAZyme HRGMv2_3990_210 HRGMv2_3990_210_4 4164 5351 - GH23
pfam HRGMv2_3990_210 HRGMv2_3990_210_5 5419 6159 - DUF5683
pfam HRGMv2_3990_210 HRGMv2_3990_210_6 6210 7109 - ParBc | HTH_ParB | ParB_dimer
TC HRGMv2_3990_210 HRGMv2_3990_210_7 7188 7952 - 8.A.3.2.3
pfam HRGMv2_3990_210 HRGMv2_3990_210_8 8149 8931 + SurE
CAZyme HRGMv2_3990_210 HRGMv2_3990_210_9 9074 10234 + GT19
Gene ID: HRGMv2_3990_210_2
Type: CAZyme
Location: 654 - 1472 (-)
Gene ID: HRGMv2_3990_210_3
Type: STP
Location: 1727 - 4000 (-)
Gene ID: HRGMv2_3990_210_4
Type: CAZyme
Location: 4164 - 5351 (-)
Gene ID: HRGMv2_3990_210_5
Type: pfam
Location: 5419 - 6159 (-)
Gene ID: HRGMv2_3990_210_6
Type: pfam
Location: 6210 - 7109 (-)
Gene ID: HRGMv2_3990_210_7
Type: TC
Location: 7188 - 7952 (-)
Gene ID: HRGMv2_3990_210_8
Type: pfam
Location: 8149 - 8931 (+)
Gene ID: HRGMv2_3990_210_9
Type: CAZyme
Location: 9074 - 10234 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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