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Cluster: HRGMv2_3990_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3990_203 HRGMv2_3990_203_9 14307 14882 - 9.B.171.1.2
STP HRGMv2_3990_203 HRGMv2_3990_203_10 15563 16450 - PfkB
TC HRGMv2_3990_203 HRGMv2_3990_203_11 16563 17768 - 2.A.1.7.17
CAZyme HRGMv2_3990_203 HRGMv2_3990_203_12 17887 19680 - GH32
CAZyme HRGMv2_3990_203 HRGMv2_3990_203_13 19869 21449 - GH32
pfam HRGMv2_3990_203 HRGMv2_3990_203_14 21647 23047 - DUF4960
pfam HRGMv2_3990_203 HRGMv2_3990_203_15 23077 24810 - SusD_RagB | SusD-like_3
TC HRGMv2_3990_203 HRGMv2_3990_203_16 24841 27945 - 1.B.14.6.1
Gene ID: HRGMv2_3990_203_9
Type: TC
Location: 14307 - 14882 (-)
Gene ID: HRGMv2_3990_203_10
Type: STP
Location: 15563 - 16450 (-)
Gene ID: HRGMv2_3990_203_11
Type: TC
Location: 16563 - 17768 (-)
Gene ID: HRGMv2_3990_203_12
Type: CAZyme
Location: 17887 - 19680 (-)
Gene ID: HRGMv2_3990_203_13
Type: CAZyme
Location: 19869 - 21449 (-)
Gene ID: HRGMv2_3990_203_14
Type: pfam
Location: 21647 - 23047 (-)
Gene ID: HRGMv2_3990_203_15
Type: pfam
Location: 23077 - 24810 (-)
Gene ID: HRGMv2_3990_203_16
Type: TC
Location: 24841 - 27945 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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