Cluster: HRGMv2_3990_CGC2
🧬 Cluster Details
- Gene Count: 21
- CAZyme Count: 16
- Substrate:
- Genome ID: HRGMv2_3990
- CGC Family ID: CGCFAM_00306
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_6 | 6187 | 8298 | + | GH127 |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_7 | 8318 | 10084 | + | GH141 |
| TC | HRGMv2_3990_7 | HRGMv2_3990_7_8 | 10282 | 11649 | + | 2.A.1.1.74 |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_9 | 11633 | 13720 | + | GH78 |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_10 | 13717 | 16359 | + | GH138 |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_11 | 16524 | 20633 | + | CBM57 | CBM97 | GH137 | GH2 |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_12 | 20804 | 23902 | + | GH2 |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_13 | 23953 | 26766 | + | GH2 |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_14 | 26915 | 29917 | + | GH106 |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_15 | 30031 | 31440 | + | CE20 |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_16 | 31677 | 34031 | + | GH139 |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_17 | 34047 | 36794 | + | CBM67 | GH78 |
| NULL(UNKNOWN) | HRGMv2_3990_7 | HRGMv2_3990_7_18 | 37377 | 37499 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_19 | 37508 | 38221 | - | GT26 |
| pfam | HRGMv2_3990_7 | HRGMv2_3990_7_20 | 38224 | 39300 | - | PS_pyruv_trans |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_21 | 39746 | 40672 | - | GT2 |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_22 | 40777 | 41763 | - | GT4 |
| pfam | HRGMv2_3990_7 | HRGMv2_3990_7_23 | 41944 | 42507 | - | Hexapep | Hexapep_2 |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_24 | 42531 | 43568 | - | GT2 |
| pfam | HRGMv2_3990_7 | HRGMv2_3990_7_25 | 43698 | 44216 | - | Hexapep | Hexapep_2 |
| CAZyme | HRGMv2_3990_7 | HRGMv2_3990_7_26 | 44213 | 45127 | - | GT11 |
Gene ID: HRGMv2_3990_7_6
Type: CAZyme
Location: 6187 - 8298 (+)
Type: CAZyme
Location: 6187 - 8298 (+)
Gene ID: HRGMv2_3990_7_7
Type: CAZyme
Location: 8318 - 10084 (+)
Type: CAZyme
Location: 8318 - 10084 (+)
Gene ID: HRGMv2_3990_7_8
Type: TC
Location: 10282 - 11649 (+)
Type: TC
Location: 10282 - 11649 (+)
Gene ID: HRGMv2_3990_7_9
Type: CAZyme
Location: 11633 - 13720 (+)
Type: CAZyme
Location: 11633 - 13720 (+)
Gene ID: HRGMv2_3990_7_10
Type: CAZyme
Location: 13717 - 16359 (+)
Type: CAZyme
Location: 13717 - 16359 (+)
Gene ID: HRGMv2_3990_7_11
Type: CAZyme
Location: 16524 - 20633 (+)
Type: CAZyme
Location: 16524 - 20633 (+)
Gene ID: HRGMv2_3990_7_12
Type: CAZyme
Location: 20804 - 23902 (+)
Type: CAZyme
Location: 20804 - 23902 (+)
Gene ID: HRGMv2_3990_7_13
Type: CAZyme
Location: 23953 - 26766 (+)
Type: CAZyme
Location: 23953 - 26766 (+)
Gene ID: HRGMv2_3990_7_14
Type: CAZyme
Location: 26915 - 29917 (+)
Type: CAZyme
Location: 26915 - 29917 (+)
Gene ID: HRGMv2_3990_7_15
Type: CAZyme
Location: 30031 - 31440 (+)
Type: CAZyme
Location: 30031 - 31440 (+)
Gene ID: HRGMv2_3990_7_16
Type: CAZyme
Location: 31677 - 34031 (+)
Type: CAZyme
Location: 31677 - 34031 (+)
Gene ID: HRGMv2_3990_7_17
Type: CAZyme
Location: 34047 - 36794 (+)
Type: CAZyme
Location: 34047 - 36794 (+)
Gene ID: HRGMv2_3990_7_18
Type:
Location: 37377 - 37499 (-)
Type:
Location: 37377 - 37499 (-)
Gene ID: HRGMv2_3990_7_19
Type: CAZyme
Location: 37508 - 38221 (-)
Type: CAZyme
Location: 37508 - 38221 (-)
Gene ID: HRGMv2_3990_7_20
Type: pfam
Location: 38224 - 39300 (-)
Type: pfam
Location: 38224 - 39300 (-)
Gene ID: HRGMv2_3990_7_21
Type: CAZyme
Location: 39746 - 40672 (-)
Type: CAZyme
Location: 39746 - 40672 (-)
Gene ID: HRGMv2_3990_7_22
Type: CAZyme
Location: 40777 - 41763 (-)
Type: CAZyme
Location: 40777 - 41763 (-)
Gene ID: HRGMv2_3990_7_23
Type: pfam
Location: 41944 - 42507 (-)
Type: pfam
Location: 41944 - 42507 (-)
Gene ID: HRGMv2_3990_7_24
Type: CAZyme
Location: 42531 - 43568 (-)
Type: CAZyme
Location: 42531 - 43568 (-)
Gene ID: HRGMv2_3990_7_25
Type: pfam
Location: 43698 - 44216 (-)
Type: pfam
Location: 43698 - 44216 (-)
Gene ID: HRGMv2_3990_7_26
Type: CAZyme
Location: 44213 - 45127 (-)
Type: CAZyme
Location: 44213 - 45127 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp944319815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.