Cluster: HRGMv2_3988_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3988
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3988_55 | HRGMv2_3988_55_2 | 2444 | 4681 | + | GH3 |
| pfam | HRGMv2_3988_55 | HRGMv2_3988_55_3 | 4759 | 5205 | - | Formyl_trans_C |
| pfam | HRGMv2_3988_55 | HRGMv2_3988_55_4 | 5294 | 5719 | - | Formyl_trans_N |
| TC | HRGMv2_3988_55 | HRGMv2_3988_55_5 | 5738 | 7561 | - | 2.A.49.6.4 |
| TC | HRGMv2_3988_55 | HRGMv2_3988_55_6 | 7558 | 7926 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_3988_55_2
Type: CAZyme
Location: 2444 - 4681 (+)
Type: CAZyme
Location: 2444 - 4681 (+)
Gene ID: HRGMv2_3988_55_3
Type: pfam
Location: 4759 - 5205 (-)
Type: pfam
Location: 4759 - 5205 (-)
Gene ID: HRGMv2_3988_55_4
Type: pfam
Location: 5294 - 5719 (-)
Type: pfam
Location: 5294 - 5719 (-)
Gene ID: HRGMv2_3988_55_5
Type: TC
Location: 5738 - 7561 (-)
Type: TC
Location: 5738 - 7561 (-)
Gene ID: HRGMv2_3988_55_6
Type: TC
Location: 7558 - 7926 (-)
Type: TC
Location: 7558 - 7926 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Species
Limisoma faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.