Cluster: HRGMv2_3988_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3988
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3988_60 | HRGMv2_3988_60_23 | 26939 | 27487 | + | CE4 |
| pfam | HRGMv2_3988_60 | HRGMv2_3988_60_24 | 27490 | 28416 | + | QueG_DUF1730 | Fer4_16 |
| pfam | HRGMv2_3988_60 | HRGMv2_3988_60_25 | 28423 | 29958 | - | Acetyltransf_1 | CN_hydrolase |
| TC | HRGMv2_3988_60 | HRGMv2_3988_60_26 | 30134 | 31498 | + | 1.B.3.1.7 |
| peptidase | HRGMv2_3988_60 | HRGMv2_3988_60_27 | 31533 | 32801 | + | M75.UPW |
| pfam | HRGMv2_3988_60 | HRGMv2_3988_60_28 | 32944 | 34548 | + | DHOR |
| TC | HRGMv2_3988_60 | HRGMv2_3988_60_29 | 34820 | 36865 | + | 9.B.14.3.1 |
Gene ID: HRGMv2_3988_60_23
Type: CAZyme
Location: 26939 - 27487 (+)
Type: CAZyme
Location: 26939 - 27487 (+)
Gene ID: HRGMv2_3988_60_24
Type: pfam
Location: 27490 - 28416 (+)
Type: pfam
Location: 27490 - 28416 (+)
Gene ID: HRGMv2_3988_60_25
Type: pfam
Location: 28423 - 29958 (-)
Type: pfam
Location: 28423 - 29958 (-)
Gene ID: HRGMv2_3988_60_26
Type: TC
Location: 30134 - 31498 (+)
Type: TC
Location: 30134 - 31498 (+)
Gene ID: HRGMv2_3988_60_27
Type: peptidase
Location: 31533 - 32801 (+)
Type: peptidase
Location: 31533 - 32801 (+)
Gene ID: HRGMv2_3988_60_28
Type: pfam
Location: 32944 - 34548 (+)
Type: pfam
Location: 32944 - 34548 (+)
Gene ID: HRGMv2_3988_60_29
Type: TC
Location: 34820 - 36865 (+)
Type: TC
Location: 34820 - 36865 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Limisoma
Species
Limisoma faecipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.