Cluster: HRGMv2_3985_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3985
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3985_1 | HRGMv2_3985_1_634 | 724208 | 724804 | - | 9.B.171.1.2 |
| NULL(UNKNOWN) | HRGMv2_3985_1 | HRGMv2_3985_1_635 | 724936 | 725031 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3985_1 | HRGMv2_3985_1_636 | 725389 | 726414 | + | DHH | DHHA1 |
| TC | HRGMv2_3985_1 | HRGMv2_3985_1_637 | 726433 | 728271 | + | 3.A.1.106.2 |
| CAZyme | HRGMv2_3985_1 | HRGMv2_3985_1_638 | 730078 | 731760 | - | GH13_44 |
Gene ID: HRGMv2_3985_1_634
Type: TC
Location: 724208 - 724804 (-)
Type: TC
Location: 724208 - 724804 (-)
Gene ID: HRGMv2_3985_1_635
Type:
Location: 724936 - 725031 (+)
Type:
Location: 724936 - 725031 (+)
Gene ID: HRGMv2_3985_1_636
Type: pfam
Location: 725389 - 726414 (+)
Type: pfam
Location: 725389 - 726414 (+)
Gene ID: HRGMv2_3985_1_637
Type: TC
Location: 726433 - 728271 (+)
Type: TC
Location: 726433 - 728271 (+)
Gene ID: HRGMv2_3985_1_638
Type: CAZyme
Location: 730078 - 731760 (-)
Type: CAZyme
Location: 730078 - 731760 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp002362235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.