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Cluster: HRGMv2_3985_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3985_1 HRGMv2_3985_1_575 644547 646760 - GH3
CAZyme HRGMv2_3985_1 HRGMv2_3985_1_576 646780 648288 - GH16_3
pfam HRGMv2_3985_1 HRGMv2_3985_1_577 648362 650395 - DUF5125 | DUF5121
TC HRGMv2_3985_1 HRGMv2_3985_1_578 650418 651920 - 8.A.46.1.4
TC HRGMv2_3985_1 HRGMv2_3985_1_579 651936 654746 - 1.B.14.6.1
TC HRGMv2_3985_1 HRGMv2_3985_1_580 654916 655188 - 1.B.14.6.2
pfam HRGMv2_3985_1 HRGMv2_3985_1_581 655838 657508 - DUF6377
CAZyme HRGMv2_3985_1 HRGMv2_3985_1_582 657681 659417 + GH30_3
pfam HRGMv2_3985_1 HRGMv2_3985_1_583 659422 661299 + CotH
pfam HRGMv2_3985_1 HRGMv2_3985_1_584 661437 661925 + Ferritin
CAZyme HRGMv2_3985_1 HRGMv2_3985_1_585 662023 663261 + GH5_46
Gene ID: HRGMv2_3985_1_575
Type: CAZyme
Location: 644547 - 646760 (-)
Gene ID: HRGMv2_3985_1_576
Type: CAZyme
Location: 646780 - 648288 (-)
Gene ID: HRGMv2_3985_1_577
Type: pfam
Location: 648362 - 650395 (-)
Gene ID: HRGMv2_3985_1_578
Type: TC
Location: 650418 - 651920 (-)
Gene ID: HRGMv2_3985_1_579
Type: TC
Location: 651936 - 654746 (-)
Gene ID: HRGMv2_3985_1_580
Type: TC
Location: 654916 - 655188 (-)
Gene ID: HRGMv2_3985_1_581
Type: pfam
Location: 655838 - 657508 (-)
Gene ID: HRGMv2_3985_1_582
Type: CAZyme
Location: 657681 - 659417 (+)
Gene ID: HRGMv2_3985_1_583
Type: pfam
Location: 659422 - 661299 (+)
Gene ID: HRGMv2_3985_1_584
Type: pfam
Location: 661437 - 661925 (+)
Gene ID: HRGMv2_3985_1_585
Type: CAZyme
Location: 662023 - 663261 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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