Cluster: HRGMv2_3983_CGC93
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_3983
- CGC Family ID: CGCFAM_05726
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3983_20 | HRGMv2_3983_20_3 | 2501 | 3670 | - | 2.A.1.7.17 |
| CAZyme | HRGMv2_3983_20 | HRGMv2_3983_20_4 | 4096 | 5928 | - | GH32 |
| CAZyme | HRGMv2_3983_20 | HRGMv2_3983_20_5 | 6058 | 7626 | - | GH32 |
| pfam | HRGMv2_3983_20 | HRGMv2_3983_20_6 | 7659 | 9044 | - | DUF4960 |
| TC | HRGMv2_3983_20 | HRGMv2_3983_20_7 | 9088 | 10794 | - | 8.A.46.1.3 |
| TC | HRGMv2_3983_20 | HRGMv2_3983_20_8 | 10825 | 13935 | - | 1.B.14.6.1 |
| pfam | HRGMv2_3983_20 | HRGMv2_3983_20_9 | 14225 | 15073 | + | Bro-N |
| pfam | HRGMv2_3983_20 | HRGMv2_3983_20_10 | 15077 | 15958 | + | Aldose_epim |
| CAZyme | HRGMv2_3983_20 | HRGMv2_3983_20_11 | 16049 | 17476 | - | GH32 |
| CAZyme | HRGMv2_3983_20 | HRGMv2_3983_20_12 | 17623 | 20136 | - | CBM6 | CBM6 | GH43_2 |
| CAZyme | HRGMv2_3983_20 | HRGMv2_3983_20_13 | 20935 | 24177 | + | GH2 |
| CAZyme | HRGMv2_3983_20 | HRGMv2_3983_20_14 | 24277 | 26538 | + | GH92 |
| NULL(UNKNOWN) | HRGMv2_3983_20 | HRGMv2_3983_20_15 | 26737 | 29322 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3983_20 | HRGMv2_3983_20_16 | 29770 | 33048 | + | 1.B.14.6.2 |
| TC | HRGMv2_3983_20 | HRGMv2_3983_20_17 | 33060 | 35048 | + | 8.A.46.2.2 |
Gene ID: HRGMv2_3983_20_3
Type: TC
Location: 2501 - 3670 (-)
Type: TC
Location: 2501 - 3670 (-)
Gene ID: HRGMv2_3983_20_4
Type: CAZyme
Location: 4096 - 5928 (-)
Type: CAZyme
Location: 4096 - 5928 (-)
Gene ID: HRGMv2_3983_20_5
Type: CAZyme
Location: 6058 - 7626 (-)
Type: CAZyme
Location: 6058 - 7626 (-)
Gene ID: HRGMv2_3983_20_6
Type: pfam
Location: 7659 - 9044 (-)
Type: pfam
Location: 7659 - 9044 (-)
Gene ID: HRGMv2_3983_20_7
Type: TC
Location: 9088 - 10794 (-)
Type: TC
Location: 9088 - 10794 (-)
Gene ID: HRGMv2_3983_20_8
Type: TC
Location: 10825 - 13935 (-)
Type: TC
Location: 10825 - 13935 (-)
Gene ID: HRGMv2_3983_20_9
Type: pfam
Location: 14225 - 15073 (+)
Type: pfam
Location: 14225 - 15073 (+)
Gene ID: HRGMv2_3983_20_10
Type: pfam
Location: 15077 - 15958 (+)
Type: pfam
Location: 15077 - 15958 (+)
Gene ID: HRGMv2_3983_20_11
Type: CAZyme
Location: 16049 - 17476 (-)
Type: CAZyme
Location: 16049 - 17476 (-)
Gene ID: HRGMv2_3983_20_12
Type: CAZyme
Location: 17623 - 20136 (-)
Type: CAZyme
Location: 17623 - 20136 (-)
Gene ID: HRGMv2_3983_20_13
Type: CAZyme
Location: 20935 - 24177 (+)
Type: CAZyme
Location: 20935 - 24177 (+)
Gene ID: HRGMv2_3983_20_14
Type: CAZyme
Location: 24277 - 26538 (+)
Type: CAZyme
Location: 24277 - 26538 (+)
Gene ID: HRGMv2_3983_20_15
Type:
Location: 26737 - 29322 (+)
Type:
Location: 26737 - 29322 (+)
Gene ID: HRGMv2_3983_20_16
Type: TC
Location: 29770 - 33048 (+)
Type: TC
Location: 29770 - 33048 (+)
Gene ID: HRGMv2_3983_20_17
Type: TC
Location: 33060 - 35048 (+)
Type: TC
Location: 33060 - 35048 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.