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Cluster: HRGMv2_3983_CGC81

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3983_16 HRGMv2_3983_16_105 138274 141543 + 1.B.14.6.1
pfam HRGMv2_3983_16 HRGMv2_3983_16_106 141556 143142 + SusD_RagB | SusD-like_3
sulfatase HRGMv2_3983_16 HRGMv2_3983_16_107 143170 144816 + S1_24
CAZyme HRGMv2_3983_16 HRGMv2_3983_16_108 144821 146176 + GH158
NULL(UNKNOWN) HRGMv2_3983_16 HRGMv2_3983_16_109 146190 147404 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3983_16 HRGMv2_3983_16_110 147490 149805 + GH3
sulfatase HRGMv2_3983_16 HRGMv2_3983_16_111 149814 151805 + S1_24
CAZyme HRGMv2_3983_16 HRGMv2_3983_16_112 151831 154065 + GH3
Gene ID: HRGMv2_3983_16_105
Type: TC
Location: 138274 - 141543 (+)
Gene ID: HRGMv2_3983_16_106
Type: pfam
Location: 141556 - 143142 (+)
Gene ID: HRGMv2_3983_16_107
Type: sulfatase
Location: 143170 - 144816 (+)
Gene ID: HRGMv2_3983_16_108
Type: CAZyme
Location: 144821 - 146176 (+)
Gene ID: HRGMv2_3983_16_109
Type:
Location: 146190 - 147404 (+)
Gene ID: HRGMv2_3983_16_110
Type: CAZyme
Location: 147490 - 149805 (+)
Gene ID: HRGMv2_3983_16_111
Type: sulfatase
Location: 149814 - 151805 (+)
Gene ID: HRGMv2_3983_16_112
Type: CAZyme
Location: 151831 - 154065 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3983_16_105 vegan > omnivore 1.45896 0.00229
HRGMv2_3983_16_106 vegan > omnivore 1.13209 0.00229
HRGMv2_3983_16_107 vegan > omnivore 2.48924 0.00229
HRGMv2_3983_16_108 vegan > omnivore 2.46429 0.00229
HRGMv2_3983_16_108 vegetarian > omnivore 1.49921 0.03246
HRGMv2_3983_16_109 vegan > omnivore 1.07203 0.00229

🧭 Explore Read Mapping of CGC

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