Cluster: HRGMv2_3983_CGC76
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 10
- Substrate:
- Genome ID: HRGMv2_3983
- CGC Family ID: CGCFAM_00301
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3983_15 | HRGMv2_3983_15_86 | 122165 | 123655 | + | 2.A.66.2.23 |
| pfam | HRGMv2_3983_15 | HRGMv2_3983_15_87 | 123645 | 124250 | + | Hexapep | Hexapep_2 |
| CAZyme | HRGMv2_3983_15 | HRGMv2_3983_15_88 | 124262 | 125245 | + | GT2 |
| pfam | HRGMv2_3983_15 | HRGMv2_3983_15_89 | 125273 | 125836 | + | Hexapep |
| CAZyme | HRGMv2_3983_15 | HRGMv2_3983_15_90 | 125811 | 126605 | + | GT2 |
| CAZyme | HRGMv2_3983_15 | HRGMv2_3983_15_91 | 126616 | 127548 | + | GT8 |
| CAZyme | HRGMv2_3983_15 | HRGMv2_3983_15_92 | 127545 | 128486 | + | GT32 |
| CAZyme | HRGMv2_3983_15 | HRGMv2_3983_15_93 | 128483 | 129361 | + | GT14 |
| CAZyme | HRGMv2_3983_15 | HRGMv2_3983_15_94 | 129388 | 130257 | + | GT14 |
| pfam | HRGMv2_3983_15 | HRGMv2_3983_15_95 | 130254 | 131357 | + | Acyl_transf_3 |
| CAZyme | HRGMv2_3983_15 | HRGMv2_3983_15_96 | 131354 | 132352 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3983_15 | HRGMv2_3983_15_97 | 132387 | 133640 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3983_15 | HRGMv2_3983_15_98 | 133637 | 134776 | + | GT4 |
| CAZyme | HRGMv2_3983_15 | HRGMv2_3983_15_99 | 134792 | 135907 | + | GT4 |
| CAZyme | HRGMv2_3983_15 | HRGMv2_3983_15_100 | 135938 | 137074 | + | GT4 |
| pfam | HRGMv2_3983_15 | HRGMv2_3983_15_101 | 137071 | 137868 | + | Poly_export | SLBB | SLBB_2 |
| TC | HRGMv2_3983_15 | HRGMv2_3983_15_102 | 137885 | 140260 | + | 8.A.3.3.4 |
Gene ID: HRGMv2_3983_15_86
Type: TC
Location: 122165 - 123655 (+)
Type: TC
Location: 122165 - 123655 (+)
Gene ID: HRGMv2_3983_15_87
Type: pfam
Location: 123645 - 124250 (+)
Type: pfam
Location: 123645 - 124250 (+)
Gene ID: HRGMv2_3983_15_88
Type: CAZyme
Location: 124262 - 125245 (+)
Type: CAZyme
Location: 124262 - 125245 (+)
Gene ID: HRGMv2_3983_15_89
Type: pfam
Location: 125273 - 125836 (+)
Type: pfam
Location: 125273 - 125836 (+)
Gene ID: HRGMv2_3983_15_90
Type: CAZyme
Location: 125811 - 126605 (+)
Type: CAZyme
Location: 125811 - 126605 (+)
Gene ID: HRGMv2_3983_15_91
Type: CAZyme
Location: 126616 - 127548 (+)
Type: CAZyme
Location: 126616 - 127548 (+)
Gene ID: HRGMv2_3983_15_92
Type: CAZyme
Location: 127545 - 128486 (+)
Type: CAZyme
Location: 127545 - 128486 (+)
Gene ID: HRGMv2_3983_15_93
Type: CAZyme
Location: 128483 - 129361 (+)
Type: CAZyme
Location: 128483 - 129361 (+)
Gene ID: HRGMv2_3983_15_94
Type: CAZyme
Location: 129388 - 130257 (+)
Type: CAZyme
Location: 129388 - 130257 (+)
Gene ID: HRGMv2_3983_15_95
Type: pfam
Location: 130254 - 131357 (+)
Type: pfam
Location: 130254 - 131357 (+)
Gene ID: HRGMv2_3983_15_96
Type: CAZyme
Location: 131354 - 132352 (+)
Type: CAZyme
Location: 131354 - 132352 (+)
Gene ID: HRGMv2_3983_15_97
Type:
Location: 132387 - 133640 (+)
Type:
Location: 132387 - 133640 (+)
Gene ID: HRGMv2_3983_15_98
Type: CAZyme
Location: 133637 - 134776 (+)
Type: CAZyme
Location: 133637 - 134776 (+)
Gene ID: HRGMv2_3983_15_99
Type: CAZyme
Location: 134792 - 135907 (+)
Type: CAZyme
Location: 134792 - 135907 (+)
Gene ID: HRGMv2_3983_15_100
Type: CAZyme
Location: 135938 - 137074 (+)
Type: CAZyme
Location: 135938 - 137074 (+)
Gene ID: HRGMv2_3983_15_101
Type: pfam
Location: 137071 - 137868 (+)
Type: pfam
Location: 137071 - 137868 (+)
Gene ID: HRGMv2_3983_15_102
Type: TC
Location: 137885 - 140260 (+)
Type: TC
Location: 137885 - 140260 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.