Cluster: HRGMv2_3983_CGC70
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_3983
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3983_14 | HRGMv2_3983_14_69 | 92630 | 95671 | + | 1.B.14.6.1 |
| TC | HRGMv2_3983_14 | HRGMv2_3983_14_70 | 95689 | 97170 | + | 8.A.46.1.3 |
| CAZyme | HRGMv2_3983_14 | HRGMv2_3983_14_71 | 97195 | 98823 | + | GH144 |
| CAZyme | HRGMv2_3983_14 | HRGMv2_3983_14_72 | 98832 | 100490 | + | GH35 |
| pfam | HRGMv2_3983_14 | HRGMv2_3983_14_73 | 100548 | 101780 | + | BACON |
| TF | HRGMv2_3983_14 | HRGMv2_3983_14_74 | 101965 | 104751 | + | GerE |
| CAZyme | HRGMv2_3983_14 | HRGMv2_3983_14_75 | 104920 | 107238 | + | GH78 |
| CAZyme | HRGMv2_3983_14 | HRGMv2_3983_14_76 | 107276 | 109555 | + | GH3 |
| CAZyme | HRGMv2_3983_14 | HRGMv2_3983_14_77 | 109552 | 113199 | + | CBM67 | GH78 |
| CAZyme | HRGMv2_3983_14 | HRGMv2_3983_14_78 | 113354 | 117196 | - | GH31_18 |
| sulfatase | HRGMv2_3983_14 | HRGMv2_3983_14_79 | 117627 | 119177 | - | S1_15 |
| CAZyme | HRGMv2_3983_14 | HRGMv2_3983_14_80 | 119351 | 121588 | - | GH31_16 |
| CAZyme | HRGMv2_3983_14 | HRGMv2_3983_14_81 | 121629 | 123809 | - | GH36 |
| CAZyme | HRGMv2_3983_14 | HRGMv2_3983_14_82 | 123853 | 126669 | - | CBM32 |
| pfam | HRGMv2_3983_14 | HRGMv2_3983_14_83 | 126774 | 128138 | - | BT_3987-like_N | BT_3987-like_N |
| pfam | HRGMv2_3983_14 | HRGMv2_3983_14_84 | 128171 | 130087 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_3983_14 | HRGMv2_3983_14_85 | 130100 | 133498 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_3983_14_69
Type: TC
Location: 92630 - 95671 (+)
Type: TC
Location: 92630 - 95671 (+)
Gene ID: HRGMv2_3983_14_70
Type: TC
Location: 95689 - 97170 (+)
Type: TC
Location: 95689 - 97170 (+)
Gene ID: HRGMv2_3983_14_71
Type: CAZyme
Location: 97195 - 98823 (+)
Type: CAZyme
Location: 97195 - 98823 (+)
Gene ID: HRGMv2_3983_14_72
Type: CAZyme
Location: 98832 - 100490 (+)
Type: CAZyme
Location: 98832 - 100490 (+)
Gene ID: HRGMv2_3983_14_73
Type: pfam
Location: 100548 - 101780 (+)
Type: pfam
Location: 100548 - 101780 (+)
Gene ID: HRGMv2_3983_14_74
Type: TF
Location: 101965 - 104751 (+)
Type: TF
Location: 101965 - 104751 (+)
Gene ID: HRGMv2_3983_14_75
Type: CAZyme
Location: 104920 - 107238 (+)
Type: CAZyme
Location: 104920 - 107238 (+)
Gene ID: HRGMv2_3983_14_76
Type: CAZyme
Location: 107276 - 109555 (+)
Type: CAZyme
Location: 107276 - 109555 (+)
Gene ID: HRGMv2_3983_14_77
Type: CAZyme
Location: 109552 - 113199 (+)
Type: CAZyme
Location: 109552 - 113199 (+)
Gene ID: HRGMv2_3983_14_78
Type: CAZyme
Location: 113354 - 117196 (-)
Type: CAZyme
Location: 113354 - 117196 (-)
Gene ID: HRGMv2_3983_14_79
Type: sulfatase
Location: 117627 - 119177 (-)
Type: sulfatase
Location: 117627 - 119177 (-)
Gene ID: HRGMv2_3983_14_80
Type: CAZyme
Location: 119351 - 121588 (-)
Type: CAZyme
Location: 119351 - 121588 (-)
Gene ID: HRGMv2_3983_14_81
Type: CAZyme
Location: 121629 - 123809 (-)
Type: CAZyme
Location: 121629 - 123809 (-)
Gene ID: HRGMv2_3983_14_82
Type: CAZyme
Location: 123853 - 126669 (-)
Type: CAZyme
Location: 123853 - 126669 (-)
Gene ID: HRGMv2_3983_14_83
Type: pfam
Location: 126774 - 128138 (-)
Type: pfam
Location: 126774 - 128138 (-)
Gene ID: HRGMv2_3983_14_84
Type: pfam
Location: 128171 - 130087 (-)
Type: pfam
Location: 128171 - 130087 (-)
Gene ID: HRGMv2_3983_14_85
Type: TC
Location: 130100 - 133498 (-)
Type: TC
Location: 130100 - 133498 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp014750685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.