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Cluster: HRGMv2_3983_CGC67

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3983_13 HRGMv2_3983_13_100 129514 130419 - 1.A.23.2.1
TC HRGMv2_3983_13 HRGMv2_3983_13_101 130647 132929 + 1.B.14.14.1
TC HRGMv2_3983_13 HRGMv2_3983_13_102 132943 133557 + 4.B.1.1.4
pfam HRGMv2_3983_13 HRGMv2_3983_13_103 133554 134183 + TPK_catalytic | Thi_PPkinase_C
pfam HRGMv2_3983_13 HRGMv2_3983_13_104 134199 135518 - HlyD_3 | Biotin_lipoyl_2
TC HRGMv2_3983_13 HRGMv2_3983_13_105 135522 137750 - 3.A.1.112.9
CAZyme HRGMv2_3983_13 HRGMv2_3983_13_106 137767 139914 - GT11
CAZyme HRGMv2_3983_13 HRGMv2_3983_13_107 139911 140807 - GT2
Gene ID: HRGMv2_3983_13_100
Type: TC
Location: 129514 - 130419 (-)
Gene ID: HRGMv2_3983_13_101
Type: TC
Location: 130647 - 132929 (+)
Gene ID: HRGMv2_3983_13_102
Type: TC
Location: 132943 - 133557 (+)
Gene ID: HRGMv2_3983_13_103
Type: pfam
Location: 133554 - 134183 (+)
Gene ID: HRGMv2_3983_13_104
Type: pfam
Location: 134199 - 135518 (-)
Gene ID: HRGMv2_3983_13_105
Type: TC
Location: 135522 - 137750 (-)
Gene ID: HRGMv2_3983_13_106
Type: CAZyme
Location: 137767 - 139914 (-)
Gene ID: HRGMv2_3983_13_107
Type: CAZyme
Location: 139911 - 140807 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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